Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 31 Aligned Residues 295 % Identity 18% Template c3c1aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (zp_00056571.1) from2 magnetospirillum magnetotacticum ms-1 at 1.85 a resolution Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q
Query Conservation
Alig confidence																																															.	.	.
Template Conservation																																															.	.	.
Template Sequence		V	R	L	A	L	I	G	A	G	R	W	G	K	N	Y	I	R	T	I	A	G	L	P	G	A	A	L	V	R	L	A	S	S	N	P	D	N	L	A	L	V	P	P	G	C	.	.	.	V	I	E	S	D	W	R	S	V	V	S	A	P	E	V	E	A	V	I	I	A	T	P	P	A	T	H	A	E	I	T	L
Template Known Secondary structure										T	T	T	T		S							T		T	T									S						T	T			T	T		.	.	.				S							T		S	S								S		G	G	G
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L	D
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	A	I	A	S	G	K	A	V	L	V	E	K	P	L	T	L	D	L	A	E	A	E	A	V	A	A	A	A	K	A	T	G	V	X	V	W	V	E	H	T	Q	L	F	N	P	A	W	E	A	L	K	A	D	L	T	S	I	G	P	I	L	A	V	R	S	E	A	G	N	H	G	P	Y	R	P	.	.	.	.
Template Known Secondary structure							T							S	S	S		S																								G	G	G	G										T	G	G	G	G		S																T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																		.													.	.	.
Query SS confidence																																		.													.	.	.
Query Sequence		G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	.	E	P	K	S	V	Q	A	T	A	S	L	L	.	.	.	A	S	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V	S	D	S	V	L	A
Query Conservation																																		.													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	G	V	P	X	L	W	D	W	G	A	H	D	V	S	X	V	L	D	L	X	G	R	D	P	D	S	T	S	A	S	W	A	A	R	G	E	K	D	G	G	E	A	G	D	V	T	L	T	L	A	F	S	T	V	E	A	H	I	R	L	C	N	T	X	D	K	C	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T																					S	S			S													T	T													T	T									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	.	.	.	.	.	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	G	L	A	V	S	R	I	T	A	K	L	L	T	E
Query Conservation																																.	.	.	.	.
Alig confidence																																.	.	.	.	.
Template Conservation
Template Sequence		L	A	V	F	G	E	A	G	T	L	V	X	D	D	R	A	T	D	K	L	T	L	H	P	P	Q	P	D	G	N	W	P	V	G	Q	G	H	A	L	T	V	T	D	E	X	P	L	T	R	A	V	R	L	F	A	G	A	V	R	Q	P	E	P	G	P	S	P	L	E	L	G	L	R	V	V	R	V	L	G	A
Template Known Secondary structure							S	S							T	T	S	S	S	S								S	S						S																								S	S	S					S	S	B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		313
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		313

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions