Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 23 Aligned Residues 316 % Identity 15% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

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		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure										.	.	.	.															.																											.	.
Query SS confidence										.	.	.	.															.																											.	.
Query Sequence		I	R	F	A	V	I	G	T	.	.	.	.	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	.	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	.	.	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S
Query Conservation										.	.	.	.															.																											.	.
Alig confidence										.	.	.	.															.																											.	.
Template Conservation
Template Sequence		I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	S	S	Q	F	Q	I	T	A	L	Y	S	P	K	I	E	T	S	I	A	T	I	Q	R	L	K	L	S	N	A	T	A	F	P	T	L	E	S	F	A	S	S	S	T	I	D	M	I	V	I	A	I	Q	V	A
Template Known Secondary structure								S			S	S	S	S	S	G	G	G	T								T	T	T	T									S	S											T	T		T	T					S	S								S	S		S						S		G	G
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		L	H	F	S	Q	T	Q	L	F	L	S	H	K	.	.	.	.	.	.	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	S	I	Y	K	A	A	A	E	R	G	V	Q	T	I	I	S	L	Q	G	R	K	S	P	Y	I	L	R	A	K	E	L	I	S	Q	G	Y	I	G	D	I	N	S	I	E
Template Known Secondary structure		G												G	G	G		T	T								S	S			S	S															T								G	G	G	G													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		149	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.																			.
Predicted Secondary structure								.																																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	C	Q	Y	S	S	.	R	Y	Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	.	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation								.																																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																																								.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	N	G	G	W	Y	G	Y	E	R	P	V	K	S	P	K	Y	I	Y	E	I	G	N	G	V	D	L	V	T	T	T	F	G	H	T	I	D	I	L	Q	Y	M	T	S	S	Y	F	S	R	I	N	A	M	V	F	N	N	I	P	E	Q	E	L	I	D	E	R	G	N	R	L	G	Q	R	V	P	K	T
Template Known Secondary structure							S	S		S	S				T	T	S		G	G	G	G	S	T	T	S	S		S	T	T	T	T														T															S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	V	S	.	.	.	.	.	.	.	D	S	V	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	.	.	.	.	.	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I
Query Conservation																										.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		V	P	D	H	L	L	F	Q	G	T	L	L	N	G	N	V	P	V	S	C	S	F	K	G	G	K	P	T	K	K	F	T	K	N	L	V	I	D	I	H	G	T	K	G	D	L	K	L	E	G	D	A	G	F	A	E	I	S	N	L	V	L	Y	Y	S	G	T	R	K	E	I	M	K	V	Y	H	L	R	N	Y
Template Known Secondary structure		S		S									T	T	T	T										S	S	S			S	S	S		S								S	S								S	S	S		G	G	G																					T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.														.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	V	D	H	P	G	L	A	V	S	R	I	T	A	K	L	L	T	E	I	R	R	Q	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	I	V	G	N	I	H	R	L	Y	Q	S	I	S	D	F	H	F	N	T	S	Q	F	V	M	Q	G	F	D	F	E	G	F	P	T	L	M	D	A	L	I	L	H	R	L	I	E	S	V	Y	K	S	N
Template Known Secondary structure																				T	T					S			T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions