Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 14 Aligned Residues 317 % Identity 22% Template c2q4eB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase at4g09670; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670 Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	.	.	.	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		I	R	I	G	V	X	G	C	A	D	I	A	R	K	V	S	R	A	I	H	L	A	P	N	A	T	I	S	G	V	A	S	R	S	L	E	K	A	K	A	F	A	T	A	N	N	Y	P	E	S	T	K	I	H	G	S	Y	E	S	L	L	E	D	P	E	I	D	A	L	Y	V	P	L	P	T	S	L	H	V	E
Template Known Secondary structure								S			T										T	T		S	S									S												T	T			T	T	S				S							T		T	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	A	I	K	A	A	E	K	G	K	H	I	L	L	E	K	P	V	A	X	N	V	T	E	F	D	K	I	V	D	A	C	E	A	N	G	V	Q	I	X	D	G	T	X	W	V	H	N	P	R	T	A	L	L	K	E	F	L	S	D	S	E	R	F	G	Q	L	K	T	V	Q	S	C	F	S	F	A	G	D	E
Template Known Secondary structure									T	T							S	S			S	S														T	T								G	G	G	T	S													T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																						.	.								.	.																							.
Query SS confidence																																						.	.								.	.																							.
Query Sequence		Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	.	.	P	K	S	V	Q	A	T	.	.	A	S	L	L	A	S	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	.	V	T	L	Q	H	S	K	V	S	D
Query Conservation																																						.	.								.	.																							.
Alig confidence																																						.	.								.	.																							.
Template Conservation
Template Sequence		D	F	L	K	N	D	I	R	V	K	P	G	L	D	G	L	G	A	L	G	D	A	G	W	Y	A	I	R	A	T	L	L	A	N	N	F	E	L	P	K	T	V	T	A	F	P	G	A	V	L	N	E	A	G	V	I	L	S	C	G	A	S	L	S	W	E	D	G	R	T	A	T	I	Y	C	S	F	L	A	N
Template Known Secondary structure								T	T	T	S	S	S	T	T	T	T	T					T												T	T	T				S						S						T	T	S												S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.																.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	X	E	I	T	A	I	G	T	K	G	T	L	R	V	H	D	F	I	I	P	Y	K	E	T	E	A	S	F	T	T	S	T	K	A	W	F	N	D	L	V	T	A	W	V	S	P	P	S	E	H	T	V	K	T	E	L	P	Q	E	A	C	X	V	R	E	F	A	I	K	N	N	G	A	K	P	D	G	Y
Template Known Secondary structure											S	S						S		S	S	S		S		T	T									S			B		T	T	S	S	S	B	S	S										S	S													T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	V	S	R	I	T	A	K	L	L	T	E	I	R	R	Q	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	P	S	I	S	R	K	T	Q	L	V	V	D	A	V	K	E	S	V	D
Template Known Secondary structure																					T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions