Job Description P42599 Confidence 98.01% Date Thu Jan 5 12:01:45 GMT 2012 Rank 175 Aligned Residues 209 % Identity 13% Template c2pkrI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor; PDBTitle: crystal structure of (a+cte)4 chimeric form of2 photosyntetic glyceraldehyde-3-phosphate dehydrogenase,3 complexed with nadp Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	.	.	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.											.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		L	K	V	A	I	N	G	F	G	R	I	G	R	N	F	L	R	C	W	H	G	R	K	D	S	P	L	D	V	V	V	I	N	D	T	G	.	.	G	V	K	Q	A	S	H	L	L	K	Y	D	S	I	L	G	T	F	D	A	D	V	K	T	A	G	D	S	A	I	S	V	D	G	K	V	I	K	V	V	S	D
Template Known Secondary structure										S												T		S	S		S									T	T	.	.													T	T	T		S		S	S						T	T	S					T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
													63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q	L	F	L	S	H	K	.	I	N	V	I	C	E	K	P	L	A	S	.	.	.	.	.	.	.	.	.	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.
Template Sequence		R	N	P	V	N	L	P	W	G	D	M	G	I	D	L	V	I	E	G	T	G	V	F	V	D	R	D	G	A	G	K	H	L	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	G	D	I	P	T	Y	V	V	G	V	N	E	E	G	Y	T	.	.	.	.	.	.	.	.	H	A	D	T	I	I	S	N	A
Template Known Secondary structure		S		G	G	G	S						T								S	S	S			B					T					T	T		S					S	S			B	S	S			B			T	T	T	T	G	G	G			.	.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	.	S	V	Q	A
Query Conservation																																																																													.
Alig confidence																																																																						.							.
Template Conservation																																																																						.
Template Sequence		S	C	T	T	N	C	L	A	P	F	V	K	V	L	D	Q	K	F	G	I	I	K	G	T	M	T	T	T	H	S	Y	T	G	D	Q	R	L	L	D	A	S	H	R	D	L	R	R	A	R	A	A	C	L	N	I	V	P	T	S	T	G	A	A	K	A	V	A	L	.	V	L	P	N	L	K	G	K	L	N	G
Template Known Secondary structure																			T															T	T	S		S	S	S				S	S	T	T	T	T	S		T	T	T																.			G	G	G	T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S	L	L	A	S	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	R	V	P	T	P	N	V	S	V	V	D	L	V	V	Q	V	S	K
Template Known Secondary structure							S		S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions