Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 34 Aligned Residues 312 % Identity 13% Template c2p2sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase (yp_050235.1) from2 erwinia carotovora atroseptica scri1043 at 1.25 a resolution Resolution 1.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	F	A	A	I	G	L	A	H	N	H	I	Y	D	X	C	Q	Q	L	I	D	A	G	A	E	L	A	G	V	F	E	S	D	S	D	N	R	A	K	F	T	S	L	F	P	S	V	P	F	A	A	S	A	E	Q	L	I	T	D	A	S	I	D	L	I	A	C	A	V	I	P	C	D	R	A	E	L	A	L
Template Known Secondary structure										S	S	T												T	T									S		T	T	S								S	T	T			B		S							T		T	T								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	.	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L
Query Conservation																																															.
Alig confidence																																															.																													.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		R	T	L	D	A	G	K	D	F	F	T	A	K	P	P	L	T	T	L	E	Q	L	D	A	V	Q	R	R	V	A	E	T	G	R	K	F	A	V	Y	F	N	E	R	I	N	V	D	S	A	L	F	A	G	E	L	V	Q	R	G	E	I	G	R	V	I	Q	T	X	G	V	G	P	H	R	.	.	.	.	E	R
Template Known Secondary structure						T	T							S	S			S																								T	T	T	T	T													T	T	T	T	S	S											B	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																			.															.	.	.	.	.																								.	.	.	.
Query SS confidence																																			.															.	.	.	.	.																								.	.	.	.
Query Sequence		D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	.	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	.	.	.	.	.	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	V	T	L	Q	H	S	K	.	.	.	.
Query Conservation																																			.															.	.	.	.	.																								.	.	.	.
Alig confidence																																			.															.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		G	A	R	P	D	W	F	Y	Q	K	R	Q	Y	G	G	I	L	C	D	I	G	I	H	Q	I	E	Q	F	L	Y	F	T	G	N	T	N	A	R	V	V	T	S	Q	T	A	N	Y	H	H	P	H	H	P	E	F	E	D	F	G	D	A	X	L	L	G	D	N	G	A	T	G	Y	F	R	C	D	W	F	T	P
Template Known Secondary structure		S				G	G	G	G												T													T		S												S	S		T	T	S	T	T			S									T	T	S									S	B
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
					231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.	.	.																								.	.
Query SS confidence		.	.	.																								.	.
Query Sequence		.	.	.	V	S	D	S	V	L	A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	.	.	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	P	G	L	A	V	S	R	I
Query Conservation		.	.	.																								.	.
Alig confidence		.	.	.																								.	.
Template Conservation
Template Sequence		D	G	L	S	V	W	G	D	G	R	L	T	I	L	G	T	E	G	Y	I	E	I	R	K	Y	V	D	L	T	R	G	E	S	N	V	V	Y	L	V	N	G	K	G	E	Q	R	F	T	P	A	G	S	V	E	R	A	F	F	P	D	F	L	R	D	C	R	E	R	T	E	N	A	X	S	Q	S	H	I	F	K
Template Known Secondary structure		T	T	S	S	S	S										S	S								S		B	T	T	T	T	B		S						S	S	S								T	T	S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	L	L	T	E	I	R	R	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	E	L	S	I	L	A	Q	Q	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions