Return to main results Retrieve Phyre Job Id

Job DescriptionP42599
Confidence95.48%DateThu Jan 5 12:01:45 GMT 2012
Rank464Aligned Residues69
% Identity17%Templatec2o7qA_
PDB info PDB header:oxidoreductase,transferaseChain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70......
Predicted Secondary structure 
























Query SS confidence 









































































Query Sequence  RFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLH
Query Conservation 





 
         
       
 

 
     
   
             


     
 
 
 

   
Alig confidence 





















..


.

















..

























Template Conservation   


 



 


   

   
.. 
 .
 

   

  

     ..              






  
  
Template Sequence  TVVVIGAGGAGKALAYGAKEKA. . KVV. IANRTYERALELAEAIGG. . KALSLTDLDNYEDGMVLANTTSMGMQ
Template Known Secondary structure 


ST

..
.SSTTTT
..GGGTT



S
SSTT
T
Template Predicted Secondary structure 





...




..















Template SS confidence 









































































   455....460.........470...... ... 480.........490....... ..500.........510.........520...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions