Job Description P42599 Confidence 97.31% Date Thu Jan 5 12:01:45 GMT 2012 Rank 256 Aligned Residues 118 % Identity 20% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	.	.	.	.	F	S
Query Conservation																																																																												.	.	.	.
Alig confidence																									.		.																						.											.	.															.	.	.	.
Template Conservation																									.		.																						.											.	.
Template Sequence		S	I	L	V	L	G	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	.	K	.	V	F	L	W	N	R	T	K	E	K	A	I	K	L	A	Q	K	F	P	L	E	.	V	V	N	S	P	E	E	V	I	D	.	.	K	V	Q	V	I	V	N	T	T	S	V	G	L	K	D	E	D	P	E	I
Template Known Secondary structure									S													T	T		.		.						S	S											S				.			S		G	G	G	T	G	G	.	.	G		S						S	S	T	T	S	S	T	T				S
Template Predicted Secondary structure																									.		.																						.											.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		Q	T	Q	L	F	L	S	H	K	I	N	V	.	.	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R
Query Conservation														.	.
Alig confidence														.	.						.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		F	N	Y	D	L	I	K	K	D	H	V	V	V	D	I	I	Y	K	E	.	.	.	.	.	.	.	.	T	K	L	L	K	K	A	K	E	K	G	A	K	L	L	D	G	L	P	M	L	L	W	Q	G	I	E	A	F	K
Template Known Secondary structure		S		G	G	G			T	T							S	S	S		.	.	.	.	.	.	.	.										T	T						S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions