Job Description P42599 Confidence 96.74% Date Thu Jan 5 12:01:45 GMT 2012 Rank 344 Aligned Residues 118 % Identity 17% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	.	.	.	.	F	S
Query Conservation																																																																												.	.	.	.
Alig confidence																									.				.																			.	.									.	.	.																.	.	.	.
Template Conservation																									.				.																			.	.									.	.	.
Template Sequence		P	A	L	V	L	G	A	G	G	A	G	R	A	V	A	F	A	L	R	E	A	G	L	.	E	V	W	.	V	W	N	R	T	P	Q	R	A	L	A	L	A	E	E	F	G	L	.	.	R	A	V	P	L	E	K	A	.	.	.	R	E	A	R	L	L	V	N	A	T	R	V	G	L	E	D	P	S	A	S	P
Template Known Secondary structure									S													T	T		.				.				S	S												T		.	.					G	G	G	G	.	.	.	G	G		S						S	S	T	T	T	T		T	T			S
Template Predicted Secondary structure																									.				.																			.	.									.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		79	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		Q	T	Q	L	F	L	S	H	K	I	N	V	I	.	.	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R
Query Conservation															.	.
Alig confidence															.	.									.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		L	P	A	E	L	F	P	E	E	G	A	A	V	D	L	V	Y	R	P	L	W	T	R	.	.	.	.	.	.	F	L	R	E	A	K	A	K	G	L	K	V	Q	T	G	L	P	M	L	A	W	Q	G	A	L	A	F	R
Template Known Secondary structure		S		G	G	G			S	S						S			S	S	S	S			.	.	.	.	.	.								T	T						S
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions