Return to main results Retrieve Phyre Job Id

Job DescriptionP42599
Confidence96.84%DateThu Jan 5 12:01:45 GMT 2012
Rank324Aligned Residues102
% Identity14%Templatec2e37B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure of tt0471 protein from thermus thermophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40...... ...50.........60.........70.....
Predicted Secondary structure 










.......













Query SS confidence 











































. . . . . . .




























Query Sequence  RFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDF. . . . . . . SVEHLFTSLEAMAESDAIDAVYIASPNSL
Query Conservation 





 
         
       
 

 
     
   
   .......          


     
 
 
 

   
Alig confidence 











































.......













..












Template Conservation 

 




 

   
  
       

 
 
       
 
 

                   
 .. 








  
Template Sequence  KVGIVGSGXVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVRAGSYGDLE. . GARAVVLAAGVAR
Template Known Secondary structure 

STT

S
SSTTGGGS




GGGGT..T
S

S


Template Predicted Secondary structure 


















..







Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60...... ...70.........
 
   76. ..80.........90.........100......
Predicted Secondary structure  .............









Query SS confidence 

. . . . . . . . . . . . .




























Query Sequence  HF. . . . . . . . . . . . . SQTQLFLSHKINVICEKPLASNLAEVDAA
Query Conservation 
 .............     

  

 

 




    

  
Alig confidence 

.............




























Template Conservation        
  
       
    
   






 
         
Template Sequence  LQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQVAYRL
Template Known Secondary structure 
TT

SSS
Template Predicted Secondary structure 






Template SS confidence 











































   86...90.........100.........110.........120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions