Job Description P42599 Confidence 99.30% Date Thu Jan 5 12:01:45 GMT 2012 Rank 76 Aligned Residues 99 % Identity 9% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q
Query Conservation
Alig confidence																																																		.												.
Template Conservation																																																		.												.
Template Sequence		W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	.	H	V	D	L	L	P	Q	R	V	P	G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D
Template Known Secondary structure										S										S				S	S									S		T	T	T	T	T				T	T					.		G	G	G					S	T	T	.	T								S
Template Predicted Secondary structure																																																		.												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		82	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	F	L	S	H	K	.	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K
Template Known Secondary structure							T								S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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