Job Description P42599 Confidence 95.75% Date Thu Jan 5 12:01:45 GMT 2012 Rank 444 Aligned Residues 81 % Identity 16% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure									.																																											.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence									.																																											.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		R	F	A	V	I	G	T	.	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	.	.	.	.	.	.	.	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	.	.	.	.
Query Conservation									.																																											.	.	.	.	.	.	.																				.	.	.	.
Alig confidence									.																																											.	.	.	.	.	.	.										.	.									.	.	.	.
Template Conservation																																																																				.	.
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	E	Q	L	P	D	C	L	K	.	.	G	C	D	V	V	V	I	P	A	G	V	P
Template Known Secondary structure							T	T	T	S	T	T												T	T									S	S	S									T	T	S	S	S	S								S	G	G	G						T	.	.	T		S							S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.
			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	P	N	S	L	H	F	S	Q	T	Q	L	F	L	S
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T
Template Known Secondary structure				T	T			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions