Job Description P42599 Confidence 100.00% Date Thu Jan 5 12:01:45 GMT 2012 Rank 13 Aligned Residues 307 % Identity 20% Template c1zh8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of oxidoreductase (tm0312) from thermotoga maritima2 at 2.50 a resolution Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.											.
Query SS confidence																.											.
Query Sequence		I	R	F	A	V	I	G	T	N	W	I	T	R	Q	.	F	V	E	A	A	H	E	S	G	K	.	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q
Query Conservation																.											.
Alig confidence																.											.
Template Conservation
Template Sequence		I	R	L	G	I	V	G	C	G	I	A	A	R	E	L	H	L	P	A	L	K	N	L	S	H	L	F	E	I	T	A	V	T	S	R	T	R	S	H	A	E	E	F	A	K	X	V	G	N	P	A	V	F	D	S	Y	E	E	L	L	E	S	G	L	V	D	A	V	D	L	T	L	P	V	E	L	N	L	P	F
Template Known Secondary structure										S						T							T	T	T	T	T									S	S												S	S					S							T	T	T			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	L	F	L	S	H	K	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	K	A	L	R	K	G	V	H	V	I	C	E	K	P	I	S	T	D	V	E	T	G	K	K	V	V	E	L	S	E	K	S	E	K	T	V	Y	I	A	E	N	F	R	H	V	P	A	F	W	K	A	K	E	L	V	E	S	G	A	I	G	D	P	V	F	X	N	W	Q	I	W	V	G	X	D	E	N	N
Template Known Secondary structure							T	T	T							S	S	S	S	S	S														S	S	S							G	G	G	G													T	T	T	T	S	S										B				T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																	.
Query SS confidence																																																		.	.																	.
Query Sequence		L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	.	.	G	V	D	A	Q	G	V	V	V	M	D	Y	G	D	F	S	.	V	T	L	Q	H	S	K	V	S	D	S	V	L
Query Conservation																																																		.	.																	.
Alig confidence																																																		.	.																	.
Template Conservation
Template Sequence		K	Y	V	H	T	D	W	R	K	K	P	K	H	V	G	G	F	L	S	D	G	G	V	H	H	A	A	A	X	R	L	I	L	G	E	I	E	W	I	S	A	V	A	K	D	L	S	P	L	L	G	G	X	D	F	L	S	S	I	F	E	F	E	N	G	T	V	G	N	Y	T	I	S	Y	S	L	K	G	N	E
Template Known Secondary structure		S	G	G	G						T	T		S	T	T	T																																S	S	S	S	S											T	T	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	S	E	I	Q	G	E	A	G	S	L	V	I	E	K	L	S	E	C	Q	K	V	C	F	V	P	R	G	S	Q	M	Q	D	L	T	Q	P	Q	H	I	N	T	M	L	Y	E	A	E	L	F	A	T	L	V	D	E	H	L	V	D	H	.	P	G	L	A	V	S	R	I	T	A	K	L	L	T	E	I	R	R
Query Conservation																																																															.
Alig confidence																		.	.	.	.	.	.											.	.	.	.																										.
Template Conservation																		.	.	.	.	.	.											.	.	.	.
Template Sequence		R	F	E	I	T	G	T	K	G	K	I	S	I	S	W	D	.	.	.	.	.	.	K	I	V	L	N	E	E	E	X	K	.	.	.	.	V	P	Q	E	N	S	Y	Q	K	E	F	E	D	F	Y	Q	V	V	A	E	G	K	P	N	D	L	G	S	P	V	Q	A	L	K	D	L	A	F	I	E	A	C	V	R
Template Known Secondary structure								S	S							T	T	.	.	.	.	.	.					T	T					.	.	.	.																			T	T					S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.											.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		316	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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