Job Description P42599 Confidence 98.11% Date Thu Jan 5 12:01:45 GMT 2012 Rank 159 Aligned Residues 211 % Identity 15% Template c1vknC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:n-acetyl-gamma-glutamyl-phosphate reductase; PDBTitle: crystal structure of n-acetyl-gamma-glutamyl-phosphate reductase2 (tm1782) from thermotoga maritima at 1.80 a resolution Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure											.																																						.	.	.	.	.
Query SS confidence											.																																						.	.	.	.	.
Query Sequence		M	I	R	F	A	V	I	G	T	.	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	.	.	.	.	.	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S
Query Conservation											.																																						.	.	.	.	.
Alig confidence											.																														.								.	.	.	.	.															.	.
Template Conservation																																									.																											.	.
Template Sequence		X	I	R	A	G	I	I	G	A	T	G	Y	T	G	L	E	L	V	R	L	L	K	N	H	P	E	A	K	I	T	Y	L	S	S	R	T	Y	A	G	.	K	K	L	E	E	I	F	P	S	T	L	E	N	S	I	L	S	E	F	D	P	E	K	V	S	K	.	.	N	C	D	V	L	F	T	A	L	P	A	G
Template Known Secondary structure									S	T	T	S														T	T									T	T	T	T	T	.	S	B						G	G	G					B		B										.	.			S							S	T	T
Template Predicted Secondary structure																																									.																											.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.																			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	F	S	Q	T	Q	L	F	L	S	H	K	I	N	V	I	.	.	.	.	.	.	.	C	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F
Query Conservation																			.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.							.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																	.	.
Template Conservation											.	.																																														.	.																	.	.
Template Sequence		A	S	Y	D	L	V	R	E	L	.	.	K	G	V	K	I	I	D	L	G	A	D	F	R	F	D	D	P	G	V	Y	R	E	W	Y	G	K	E	L	S	G	Y	E	N	I	K	R	V	Y	G	L	P	E	L	H	R	.	.	E	E	I	K	N	A	Q	V	V	G	N	P	G	C	Y	P	.	.	T	S	V	I
Template Known Secondary structure											.	.		S						S	S	S	T	T	T		S	S													T	T	G	G	G	S												.	.				T	T		S										.	.
Template Predicted Secondary structure											.	.																																														.	.																	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.
		130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		H	L	L	R	Q	A	L	P	K	V	G	.	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	S	V	Q	A	T	A	S	L	L	A	S	G
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		L	A	L	A	P	A	L	K	H	N	L	V	D	P	E	T	I	L	V	D	A	K	S	G	V	S	G	A	E	K	V	D	Y	L	F	S	E	V	N	E	S	L	R	P	Y	N	V	A	K	H	R	H	V	P	E	X	E	Q	E	L	G	K	I	S	G	K	K	V	N	V	V	F	T	P	H	L	V	P	X	T
Template Known Secondary structure										T	T		S			S										G	G	G				G	G	G	S					T	T						S	T	T			T														S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		209	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	A	Q	G	V	V	V	M	D	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	I	L	S	T	I	Y	V	K	T	D
Template Known Secondary structure		S											S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions