Return to main results Retrieve Phyre Job Id

Job DescriptionP42599
Confidence100.00%DateThu Jan 5 12:01:45 GMT 2012
Rank7Aligned Residues325
% Identity19%Templatec1ofgF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:glucose-fructose oxidoreductase; PDBTitle: glucose-fructose oxidoreductase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10...... ...20.........30.........40......... 50.........60.........70......
Predicted Secondary structure 



.










....










Query SS confidence 














.
































. . . .


























Query Sequence  IRFAVIGTNWITRQF. VEAAHESGKYKLTAVYSRSLEQAQHFANDFSVE. . . . HLFTSLEAMAESDAIDAVYIASPNSLH
Query Conservation 






 
      .   
       
 

 
     
   
      ....       


     
 
 
 

   
Alig confidence 














.
































....


























Template Conservation 


 


 
  
       
       



 
     
   
   
          
   

    

 
 
 

   
Template Sequence  FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH
Template Known Secondary structure 

STTTT
SS
S
T

GGG
SSSGGGGGG
TT


S
GGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  FSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRY
Query Conservation        

  

 

 




    

  
   
        
    
  
        
   
    
           
Alig confidence 





























































.
















Template Conservation        

 




  




    
   
   
        
    
  
    

  
  .
 

 
  
        
Template Sequence  AEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRE. NQLGKLGMVTTDNSDVM
Template Known Secondary structure  TT

SS

SST



GGGS
T.TSS
S


Template Predicted Secondary structure 

















.








Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170... ......180.........190
 
   157..160.........170.........180.........190... ......200....... ..210.........220... ......
Predicted Secondary structure 

























.




.....



.
Query SS confidence 




































.













. . . . .















.





Query Sequence  QRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFG. EPKSVQATASLLAS. . . . . GVDAQGVVVMDYGDFS. VTLQHS
Query Conservation                   

 
 
 
 
 

    
 
.    
 
       ..... 
 
            .     
Alig confidence 




































.













.....















.





Template Conservation                  


       
 

    
 
     
 
                     
    
       
Template Sequence  DQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASS
Template Known Secondary structure 
TTSTTS
SSSTTS


TT
GGGSSS
STTS
Template Predicted Secondary structure 




































Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   230.........240.........250.........260......... 270.........280.........290.........300....
Predicted Secondary structure 



















.....













Query SS confidence 







































. . . . .


































Query Sequence  KVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQD. . . . . LTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSR
Query Conservation            
 
  
 
                      .....                
   
            
 
Alig confidence 







































.....


































Template Conservation            
 
  
                                             
  

           


Template Sequence  YSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGM
Template Known Secondary structure  SSS

SS
SSSS
SS


TT


SS

SS

TT


SSB
Template Predicted Secondary structure 











































Template SS confidence 















































































   271........280.........290.........300.........310.........320.........330.........340.........350
 
   305....310....... ..320.......
Predicted Secondary structure 
....









Query SS confidence 












. . . .









Query Sequence  ITAKLLTEIRRQT. . . . GVIFPADSVK
Query Conservation      

  

  
.... 
        
Alig confidence 












....









Template Conservation      
  
   
   
  
        
Template Sequence  QDVRLIQAIYEAARTGRPVNTDWGYVR
Template Known Secondary structure  SS


S



Template Predicted Secondary structure 





Template SS confidence 


























   351........360.........370.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions