Job Description P42599 Confidence 96.54% Date Thu Jan 5 12:01:45 GMT 2012 Rank 375 Aligned Residues 120 % Identity 16% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	R	S	L	E	Q	A	Q	H	F	A	N	D	F	.	.	.	.	.	.	.	.	S	V	E	H	L	F	T	S	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																								.	.				.																	.	.	.	.	.	.	.	.															.	.
Template Conservation																								.	.				.																																							.	.
Template Sequence		N	I	V	I	Y	G	A	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	.	.	N	I	I	.	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	.	.	G	V	D	I	I	I	N	A	T	P	I	G
Template Known Secondary structure									S											T	S	S	S	.	.				.				S	S																T												T	T				T	.	.	T								S		T	T
Template Predicted Secondary structure																								.	.				.																																							.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.
		75	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure					.	.	.	.	.	.															.	.
Query SS confidence					.	.	.	.	.	.															.	.
Query Sequence		L	H	F	.	.	.	.	.	.	S	Q	T	Q	L	F	L	S	H	K	I	N	V	I	.	.	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L	L	R
Query Conservation					.	.	.	.	.	.															.	.
Alig confidence					.	.	.	.	.	.															.	.								.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		M	Y	P	N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V	V	M	D	L	I	Y	N	P	L	E	T	.	.	.	.	.	.	V	L	L	K	E	A	K	K	V	N	A	K	T	I	N	G	L	G	M	L	I	Y	Q	G	A	V	A	F	K
Template Known Secondary structure			T	T			S	S			S	S		S	T	T			S	S	S								S	S	S	S		.	.	.	.	.	.								T	T	T						T
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions