Job Description P42599 Confidence 97.19% Date Thu Jan 5 12:01:45 GMT 2012 Rank 270 Aligned Residues 214 % Identity 10% Template c1ihxD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of two d-glyceraldehyde-3-phosphate2 dehydrogenase complexes: a case of asymmetry Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																																	.	.												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	A	V	I	G	T	N	W	I	T	R	Q	F	V	E	A	A	H	E	S	G	K	Y	K	L	T	A	V	Y	S	.	.	R	S	L	E	Q	A	Q	H	F	A	N	.	.	.	.	.	.	D	F	S	V	E	H	L	F	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.									.	.												.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		K	I	G	I	N	G	F	G	R	I	G	R	L	V	L	R	T	A	L	E	M	G	.	A	Q	V	V	A	V	N	D	P	F	I	A	L	E	Y	M	V	Y	M	F	K	Y	D	S	T	H	G	M	F	K	G	E	V	K	V	E	D	G	A	L	V	V	D	G	K	K	I	T	V	F	N	E	M	K	P	E	N
Template Known Secondary structure									S											T	T	T	T	.									T	T	S													T	T	T					S						S	S					T	T									S	S	G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.																																		.
Query SS confidence		.	.																																		.
Query Sequence		.	.	L	E	A	M	A	E	S	D	A	I	D	A	V	Y	I	A	S	P	N	S	L	H	F	S	Q	T	Q	L	F	L	S	H	K	.	I	N	V	I	C	E	K	P	L	A	S	N	L	A	E	V	D	A	A	I	A	C	A	R	E	N	Q	V	V	L	F	E	A	F	K	T	A	C	L	P	N	F	H	L
Query Conservation		.	.																																		.
Alig confidence		.	.					.	.	.	.																										.
Template Conservation								.	.	.	.
Template Sequence		I	P	W	S	K	A	.	.	.	.	G	A	E	Y	I	V	E	S	T	G	V	F	T	T	I	E	K	A	S	A	H	F	K	G	G	A	K	K	V	I	I	S	A	P	S	A	D	A	P	M	F	V	C	G	V	N	L	E	K	Y	S	K	D	M	K	V	V	S	N	A	S	C	T	T	N	C	L	A	P	V
Template Known Secondary structure								.	.	.	.	T								S	S	S			S					G	G	G	G	T	T	T		S					S	S			S	S	S		B			T	T	T	S	G	G	G			T	T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		82	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	R	Q	A	L	P	K	V	G	K	L	R	K	V	F	F	N	Y	C	Q	Y	S	S	R	Y	Q	R	Y	L	D	G	E	N	P	N	T	F	N	P	A	F	S	N	G	S	I	M	D	I	G	F	Y	C	L	A	S	A	V	A	L	F	G	E	P	K	.	S	V	Q	A	T	A	S	L	L	A	S	G	V	D
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		A	K	V	L	H	E	N	F	E	I	V	E	G	L	M	T	T	V	H	A	V	T	A	T	Q	K	T	V	D	G	P	S	A	K	D	W	R	G	G	R	G	A	A	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	I	P	E	L	D	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V
Template Known Secondary structure																								T	T	S	B	S	S	S				T	T		T	G	G	G	S	B	T	T	T																	S	G	G	G	T	T	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	V	V	V	M	D	Y	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	V	D	L	T	V	R	L	G	K
Template Known Secondary structure											S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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