 |
Job Description | P75876 | Confidence | 99.48% | Date | Thu Jan 5 12:15:21 GMT 2012 |
Rank | 139 | Aligned Residues | 139 |
% Identity | 14% | Template | d1xdza_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Glucose-inhibited division protein B (GidB)
|
Resolution | 1.60 |
|
 |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Y | V | E | N | K | R | V | L | N | C | F | S | Y | T | G | G | F | A | V | S | A | L | M | . |
G | G | C | S | Q | V | V | S | V | D | T | S | Q | E | A | L | D | I | A | R | Q | N | V | E | L | N | K | L | D | L | S | K | A | E | F | V | R | D | D | V | F | K | L | L | R | T | Y | R | D | R | G | E | K | F | D |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |
|   | . |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . |   |   |
|
|
Template Sequence |   |
D | F | N | Q | V | N | T | I | C | D | V | G | A | G | A | G | F | P | S | L | P | I | K | I | C | F | P | H | L | H | V | T | I | V | D | S | L | N | K | R | I | T | F | L | E | K | L | S | E | A | L | Q | L | E | . |
. |
N | T | T | F | C | H | D | R | A | E | T | F | G | Q | R | K | D | V | R | . |
E | S | Y | D |
Template Known Secondary structure |   |
| G | G | G |
|
|  |  |  |  |  |
| S | S | S |
| T | T |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | . | . | S |  |  |  |  |  | S |
|  |  |  |  | T | T |
| T | T | T | T | . | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
. | 140 | . | . |
  |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | V | M | D | P | P | K | F | V | E | N | K | S | Q | L | M | G | A | C | R | G | Y | K | D | I | N | M | L | A | I | Q | L | L | N | E | G | G | I | L | L | T | F | S | C | S | G | L | M | T | S | D | L | F | Q | K | I | I | A | D | A | A | I | D | A | G | R | D | V | Q | F | I | E | Q | F | R | Q | A | A | D |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
|
| . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
I | V | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | A | V | A | R | L | S | V | L | S | E | L | C | L | P | L | V | K | K | N | G | L | F | V | A | L | K | A | . |
. |
. |
. |
A | A | E | E | E | L | N | A | G | K | K | A | I | T | T | L | G | G | E | L | E | N | I | H | S | F | K | L | P | I | E |
Template Known Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
| S |
|  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
|
|
|
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|