Job Description P75876 Confidence 62.22% Date Thu Jan 5 12:15:21 GMT 2012 Rank 444 Aligned Residues 104 % Identity 15% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		Y	T	G	G	F	A	V	S	A	L	.	.	.	.	.	M	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	M	D	P	P	K	F
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.																																																	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	A	G	S	.	.	.	.	.	.	.	K	L	V	V	I	T	A	G	A	R
Template Known Secondary structure				S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	T	T		.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	.	.	.	E	G	G	I	L	L	T	F	S	C
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S	N
Template Known Secondary structure				T	T																										T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions