Job Description P75876 Confidence 98.65% Date Thu Jan 5 12:15:21 GMT 2012 Rank 274 Aligned Residues 135 % Identity 16% Template c3swrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	M	G	G	C	.	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																				.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	D	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	.	.	.	.	.	.	.	N	P	G	S	T	V	F	T	E	D	C	N	I	L	L	K	L	V	M	A	G	E	T	T	N	S	R	G	Q	R	L	P
Template Known Secondary structure							S		T	T	S										T	S									S	S											.	.	.	.	.	.	.		T	T	S					S												T		S	B		T	T			B
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180								.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																				.	.	.	.	.	.																																						.	.	.
Query SS confidence																				.	.	.	.	.	.																																						.	.	.
Query Sequence		R	G	E	K	F	D	V	I	V	M	D	P	P	K	F	V	E	N	.	.	.	.	.	.	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	M	.	.	.	T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A
Query Conservation																				.	.	.	.	.	.																																						.	.	.
Alig confidence																				.	.	.	.	.	.																									.	.												.	.	.
Template Conservation																																																		.	.
Template Sequence		Q	K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	.	.	R	F	F	L	L	E	N	V	R	N	F	V	S	F	K	R	S	M	V	L	K	L	T	L	R	C	L	V	R	M
Template Known Secondary structure			T	T	T		S									T	T			S	S	S											T	T	S															.	.	S								G	G	G	G	T	T	G	G	G
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		1213	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260			.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290
		361	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	V	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Q	C	T	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		1291	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions