Job Description P75876 Confidence 99.44% Date Thu Jan 5 12:15:21 GMT 2012 Rank 155 Aligned Residues 137 % Identity 20% Template c3ofkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) Resolution 1.85 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	M	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	M
Query Conservation
Alig confidence																									.																						.	.	.	.																.	.	.	.	.
Template Conservation																									.																						.	.	.	.																.	.	.	.	.
Template Sequence		A	V	S	N	G	L	E	I	G	C	A	A	G	A	F	T	E	K	L	A	P	H	C	.	K	R	L	T	V	I	D	V	M	P	R	A	I	G	R	A	C	Q	R	T	K	.	.	.	.	R	W	S	H	I	S	W	A	A	T	D	I	L	Q	F	.	.	.	.	.	S	T	A	E	L	F	D	L	I	V	V
Template Known Secondary structure		S										T	T	S							G	G	G		.								S												T	T	.	.	.	.	T		S	S								T	T	T		.	.	.	.	.			S
Template Predicted Secondary structure																									.																						.	.	.	.																.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.									.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		D	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	.	.	.	.	.	.	.	.	G	L	M	T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A	G	R	D	V	Q	F	I	E	Q	F	R
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.																																				.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation			.	.	.	.	.	.																																																												.	.	.	.
Template Sequence		A	.	.	.	.	.	.	E	V	L	Y	Y	L	E	D	M	T	Q	M	R	T	A	I	D	N	M	V	K	M	L	A	P	G	G	H	L	V	F	G	S	A	R	D	A	T	C	R	R	W	G	H	V	A	G	A	E	T	V	I	T	I	L	T	E	A	L	.	.	.	.	T	E	V	E	R	V	Q	C	Q	G
Template Known Secondary structure			.	.	.	.	.	.	S		G	G	G	S	S	S														T																				T	T		S														S	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.																																																												.	.	.	.
Template SS confidence
		114							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.
		372	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	A	D	E
Template Known Secondary structure		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions