 |
Job Description | P75876 | Confidence | 99.48% | Date | Thu Jan 5 12:15:21 GMT 2012 |
Rank | 137 | Aligned Residues | 121 |
% Identity | 15% | Template | c3ntvB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:mw1564 protein; |
PDBTitle: crystal structure of a putative caffeoyl-coa o-methyltransferase from2 staphylococcus aureus
|
Resolution | 1.55 Å |
|
 |
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
. | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | Y | Y | L | D | Q | R | D | S | R | L | A | T | R | R | Y | V | . |
. |
. |
E | N | K | R | V | L | N | C | F | S | Y | T | G | G | F | A | V | S | A | L | M | G | G | . |
C | S | Q | V | V | S | V | D | T | S | Q | E | A | L | D | I | A | R | Q | N | V | E | L | N | K | L | D | L | S | K | A | E | F | V | R |
Query Conservation |   |
|
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   | . | . | . |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
| . |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   | . |   |   |
|   |   |   |   |
Template Sequence |   |
N | E | V | P | I | V | D | R | L | T | L | D | L | I | K | Q | L | I | R | X | N | N | V | K | N | I | L | E | I | G | T | A | I | G | Y | S | S | X | Q | F | A | S | I | S | D | D | I | H | V | T | T | I | E | R | N | E | T | X | I | Q | Y | A | K | Q | N | L | A | T | Y | H | F | E | . |
N | Q | V | R | I | I | E |
Template Known Secondary structure |   |
T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | . | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . |
  |
  |   |
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | V | F | K | L | L | R | T | Y | R | D | R | G | E | K | F | D | V | I | V | M | D | P | P | K | F | V | E | N | K | S | Q | L | M | G | A | C | R | G | Y | K | D | I | N | M | L | A | I | Q | L | L | N | E | G | G | I | L | L | T |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   | . | . |   |   |
|
|   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
G | N | A | L | E | Q | F | E | N | V | N | D | . |
. |
K | V | Y | D | X | I | F | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | K | A | Q | S | K | K | F | F | E | I | Y | T | P | L | L | K | H | Q | G | L | V | I | T |
Template Known Secondary structure |   |
S |
| G | G | G |
|  |  |  |  | T | T | . | . | S |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | T | T | S | S | S |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
. | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|