Return to main results Retrieve Phyre Job Id

Job DescriptionP75876
Confidence99.67%DateThu Jan 5 12:15:21 GMT 2012
Rank55Aligned Residues152
% Identity13%Templatec3mtiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   208.210.........220.........230.........240.........250.........260.........270.........280.......
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  QRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTY
Query Conservation   
  
        
  



  
 
  
   
  
   
  

    

  
  
   
            
    
   
Alig confidence 

































.


























..













..
Template Conservation        
   
  
  


 
 
 
  
  

  .   
  

 
   
  
          ..              ..
Template Sequence  HXSHDFLAEVLDDESIVVDATXGNGNDTAFLAGL. SKKVYAFDVQEQALGKTSQRLSDLGIE. . NTELILDGHENLDH. .
Template Known Secondary structure  TT

TT
S

TTSTT.SSS
T

..
S
GGGGGG..
Template Predicted Secondary structure 











.








..






..
Template SS confidence 















































































   7..10.........20.........30.........40 .........50.........60....... ..70.........80.
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  RDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI
Query Conservation        








 
  
             

  
  

 


 

  


       
   
  
          
Alig confidence  .














...........


























...






















Template Conservation  .      
 

  
  ...........       
      




 
 
    ... 
          
      
   
Template Sequence  . YVREPIRAAIFNLGK. . . . . . . . . . . PHTTLEAIEKILDRLEVGGRLAIXIYD. . . XEKDAVLEYVIGLDQRVFTAXLY
Template Known Secondary structure  .T

S


...........

...S
TTT
Template Predicted Secondary structure  .









...........








...




Template SS confidence 















































































   82.......90...... ...100.........110.........120... ......130.........140......
 
   368.370.........
Predicted Secondary structure 









Query SS confidence 











Query Sequence  EQFRQAADHPVI
Query Conservation         
 
  
Alig confidence 











Template Conservation     
       
Template Sequence  QPLNQINTPPFL
Template Known Secondary structure 

SS
SS


Template Predicted Secondary structure 








Template SS confidence 











   164.....170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions