Job Description P75876 Confidence 97.32% Date Thu Jan 5 12:15:21 GMT 2012 Rank 329 Aligned Residues 108 % Identity 10% Template c3lkzB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase Resolution 2.00 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	.	M	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V
Query Conservation																								.
Alig confidence																								.																						.	.	.																								.	.	.	.	.
Template Conservation																																														.	.	.																								.	.	.	.	.
Template Sequence		L	E	P	V	G	K	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	M	A	T	Q	K	R	V	Q	E	V	R	G	Y	T	K	G	G	P	G	H	E	E	P	Q	.	.	.	L	V	Q	S	Y	G	W	N	I	V	T	M	K	S	G	V	D	V	F	Y	R	P	S	.	.	.	.	.	E	C	C	D	T
Template Known Secondary structure												T		T	T								T	T		T	T											S	T	T	S					.	.	.				B	T	T	G	G	G						S			T	T	S	S			.	.	.	.	.				S
Template Predicted Secondary structure																																														.	.	.																								.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.
		297	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.
Predicted Secondary structure						.																																	.
Query SS confidence						.																																	.
Query Sequence		I	V	M	D	.	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	E	G	.	G	I	L	L	T
Query Conservation						.																																	.
Alig confidence						.				.	.											.	.																.
Template Conservation										.	.											.	.
Template Sequence		L	L	C	D	I	G	E	S	.	.	S	S	S	A	E	V	E	E	H	R	.	.	T	I	R	V	L	E	M	V	E	D	W	L	H	R	G	P	R	E	F	C	V
Template Known Secondary structure										.	.		S									.	.													T	T
Template Predicted Secondary structure										.	.											.	.
Template SS confidence
		143	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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