Job Description P75876 Confidence 99.57% Date Thu Jan 5 12:15:21 GMT 2012 Rank 91 Aligned Residues 142 % Identity 13% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	M	.	.	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F
Query Conservation																										.	.
Alig confidence																										.	.																											.	.	.	.														.
Template Conservation																																																						.	.	.	.														.
Template Sequence		P	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	.	.	.	.	P	N	I	F	P	L	L	A	D	A	R	F	P	.	Q	S	Y	K	S	V	V	E	N	V
Template Known Secondary structure					T	T							T		T	T	S												T	T	S																							.	.	.	.	T	T								T	T		G	.	G	G	T	T	T	T
Template Predicted Secondary structure																																																						.	.	.	.														.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	I	V	M	D	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	M	T	S	D	L	F	Q	K	I	I	A	D	A	A	I	D	A	G	R	D	V	Q	F	I	E	Q	F	R	Q	A	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Sequence		D	V	L	Y	V	D	I	A	Q	P	.	.	.	.	.	.	.	.	.	.	.	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V	E	K	L	E	N	S	N	.	.	F	E	T	I	Q	I	I	N	L	D	P
Template Known Secondary structure									S		T	.	.	.	.	.	.	.	.	.	.	.	T																													S	S	S	S	S	T	T								T	T	T	.	.										T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.												.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.
					375	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Y	D	K	D	H
Template Known Secondary structure		T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions