Job Description P75876 Confidence 62.86% Date Thu Jan 5 12:15:21 GMT 2012 Rank 441 Aligned Residues 139 % Identity 13% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																		.	.	.											.	.	.	.
Query SS confidence																																		.	.	.											.	.	.	.
Query Sequence		L	A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	M	G	G	C	S	.	.	.	Q	V	V	S	V	D	T	S	Q	E	.	.	.	.	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R
Query Conservation																																		.	.	.											.	.	.	.
Alig confidence																																		.	.	.											.	.	.	.								.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		K	L	L	K	E	R	G	P	I	K	K	I	G	V	L	G	M	G	Y	V	G	I	P	A	A	V	L	F	A	D	A	P	C	F	E	K	V	L	G	F	Q	R	N	S	K	S	S	G	Y	K	I	E	M	L	N	R	.	.	.	.	.	.	.	G	E	S	P	L	K	G	E	E	P	G	L	E	E	L	I	G
Template Known Secondary structure									S										S	T	T											S	T	T												T	T	T	T	T						T	T	.	.	.	.	.	.	.	T				S	S			G	G	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		286	.	.	.	290	.	.												.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Y	R	D	R	G	E	.	.	.	.	.	.	.	.	.	.	.	K	F	D	V	I	V	M	D	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	M	T	S	D	L	F	Q	K	I	I	A
Query Conservation									.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	V	K	A	G	K	F	E	C	T	P	D	F	S	R	I	S	E	L	D	A	V	T	L	A	I	Q	T	P	F	A	N	P	K	D	L	E	P	D	F	S	A	L	I	D	G	I	R	N	V	G	K	Y	L	K	P	G	M	L	V	V	L	E	S	T	I	T	P	G	T	T	E	G	M	A	K	Q	I	L
Template Known Secondary structure						T	T						S		G	G	G	G	G	G		S												S	S			S	S																			T	T							S				T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		355	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions