 |
Job Description | P75876 | Confidence | 99.42% | Date | Thu Jan 5 12:15:21 GMT 2012 |
Rank | 161 | Aligned Residues | 119 |
% Identity | 19% | Template | c3g07C_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:7sk snrna methylphosphate capping enzyme; |
PDBTitle: methyltransferase domain of human bicoid-interacting protein2 3 homolog (drosophila)
|
Resolution | 2.65 Å |
|
 |
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | |
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | Y | V | E | N | K | R | V | L | N | C | F | S | Y | T | G | G | F | A | V | S | A | L | M | G | . |
G | C | S | Q | V | V | S | V | D | T | S | Q | E | A | L | D | I | A | R | Q | N | V | E | L | N | K | L | D | L | S | K | A | . |
. |
. |
. |
. |
. |
E | F | V | R | D | D | V | F | K | L | L | R | T | Y | R |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   | . |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | E | W | F | R | G | R | D | V | L | D | L | G | C | N | V | G | H | L | T | L | S | I | A | C | K | W | G | P | S | R | X | V | G | L | D | I | D | S | R | L | I | H | S | A | R | Q | N | I | V | P | L | D | G | A | D | T | S | V | F | P | N | N | V | V | F | V | T | G | N | Y | V | L | D | R | D | D | L | V | E |
Template Known Secondary structure |   |
G | G | G | T | T | T | S |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T |
|
|
| S | S | T | T |
|
| S | S | T | T | T | T |  |  |  |  |  |
|
|
|
|
| S | S |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
439 | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . |
  |
  |   |
289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | G | E | K | F | D | V | I | V | M | D | P | P | K | F | V | E | N | K | S | Q | L | M | G | A | C | R | G | Y | K | D | I | N | M | L | A | I | Q | L | L | N | E | G | G | I | L | L | T |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
Template Sequence |   |
A | Q | T | P | E | Y | D | V | V | L | C | . |
. |
. |
L | S | L | T | K | W | V | H | L | N | W | G | D | E | G | L | K | R | X | F | R | R | I | Y | R | H | L | R | P | G | G | I | L | V | L |
Template Known Secondary structure |   |
T |
|
|
|
|  |  |  |  |  |  | . | . | . |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
570 | . | . | . | . | . | . | . | . | . | 580 | |
|
|
. | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|