Job Description P75876 Confidence 97.58% Date Thu Jan 5 12:15:21 GMT 2012 Rank 320 Aligned Residues 102 % Identity 19% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.													.	.	.	.	.	.																												.
Query SS confidence																								.													.	.	.	.	.	.																												.
Query Sequence		Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	.	M	G	G	C	S	Q	V	V	S	V	D	T	.	.	.	.	.	.	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	.	D	V	F	K	L	L	R	T	Y	R	D
Query Conservation																								.													.	.	.	.	.	.																												.
Alig confidence																								.													.	.	.	.	.	.							.	.	.	.	.	.	.	.	.													.						.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	V	Q	.	.	.	.	.	.	.	.	.	S	L	G	W	N	I	I	T	F	K	D	K	T	D	I	H	R	L	.	.	.	.	.	.
Template Known Secondary structure		S										T		T	T									T	S	T	T												T	T									.	.	.	.	.	.	.	.	.	B	T	T	G	G	G						S			T	T	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.										.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		R	G	E	K	F	D	V	I	V	M	D	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	.	L	L	N	E	G	G	I	L	L	T
Query Conservation																																								.
Alig confidence													.	.	.																									.
Template Conservation													.	.	.
Template Sequence		E	P	V	K	C	D	T	L	L	C	D	.	.	.	I	G	E	S	S	S	S	S	V	T	E	G	E	R	T	V	R	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V
Template Known Secondary structure							S						.	.	.						S																					T	T			S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions