Job Description P75876 Confidence 99.81% Date Thu Jan 5 12:15:21 GMT 2012 Rank 26 Aligned Residues 142 % Identity 21% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		184	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.																	.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence													.	.	.																	.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		P	I	E	E	H	G	M	K	L	L	V	.	.	.	D	I	Q	H	G	H	K	T	G	Y	Y	L	D	Q	R	D	.	.	.	.	.	.	.	.	.	.	S	R	L	A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	M	.	.	G	G	C	S	Q	V	V	S
Query Conservation													.	.	.																	.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence													.	.	.																	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation
Template Sequence		I	V	Q	E	G	I	A	K	I	I	V	P	E	I	P	K	T	V	S	S	D	M	P	V	F	Y	N	P	R	M	R	V	N	R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	K	A	Y	A
Template Known Secondary structure						T	T										S	S			T	T			S	S			G	G	G																				S							S	S		T	T	T											S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	M	D	P	P	K	F	V	E	N	K	S	Q	L	M	G	A	C	R	G	Y	K	D	I	N	M	L	A	I	Q	L
Query Conservation
Alig confidence																																						.	.																.	.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.																.	.					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	.	.	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	P	.	.	F	G	T	P	.	.	.	.	.	.	.	.	.	.	.	V	P	F	I	E	S	V	A	L	S
Template Known Secondary structure				S															T	T			G	G	G						S							.	.	T	S			S	S										.	.	S	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.																.	.					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.												.	.	140	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	G	G	I	L	L	T	F	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	R	G	G	I	L	S	L	T	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions