Return to main results Retrieve Phyre Job Id

Job DescriptionP75876
Confidence55.65%DateThu Jan 5 12:15:21 GMT 2012
Rank467Aligned Residues115
% Identity15%Templatec2ep9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260..... ....270.........280.........290.....
Predicted Secondary structure 











........













Query SS confidence 









































. . . . . . . .





























Query Sequence  VLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL. . . . . . . . NKLDLSKAEFVRDDVFKLLRTYRDRGEKFD
Query Conservation 



  
 
  
   
  
   
  

    

  
  
   ........
            
    
         

Alig confidence 




















.



















........





























Template Conservation 


 
 

  

  

  
  .
   
                                      
        
   

Template Sequence  IVGSGLVGRSWAMLFASGGFR. VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVV
Template Known Secondary structure 

STT

.
S
TT


SSS
T
S
TTT
S
Template Predicted Secondary structure 






.




















Template SS confidence 















































































   11........20.........30. ........40.........50.........60.........70.........80.........
 
   296...300.........310.........320.........330.........340.........350.
Predicted Secondary structure 

















Query SS confidence 























































Query Sequence  VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQK
Query Conservation 






 
  
             

  
  

 


 

  


       
  
Alig confidence 






..........























..












Template Conservation   




 ..........
    
      
        

 ..
 

       
 
Template Sequence  HIQECVP. . . . . . . . . . ENLDLKRKIFAQLDSIVDDRVVLS. . SSSSCLLPSKLFT
Template Known Secondary structure 


..........S
TT

SS
..

SS

T
Template Predicted Secondary structure 

..........






..





Template SS confidence 























































   90...... ...100.........110.........120 .........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions