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Job DescriptionP75876
Confidence100.00%DateThu Jan 5 12:15:21 GMT 2012
Rank2Aligned Residues389
% Identity32%Templatec2as0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein ph1915; PDBTitle: crystal structure of ph1915 (apc 5817): a hypothetical rna2 methyltransferase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSR
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Template Sequence  XARVVVDAQAARAIGKGAXIVFKKGVVRVEGDIKPGDIVEVYTRGGKFLGKGFANPNSNIXVRIVTKDKDVEINKDLFKR
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TT

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Query Sequence  RLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPE. CSIYDRSDVA
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Template Sequence  RIKKANEYRKKVL. . KYTNVYRXVYGEADYLPGLIVDRFNDIASLQISSAGXERFKLDVAEAIXEVEPGIETVFEKNTGR
Template Known Secondary structure  TS..


SGGGGT
TTTT

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Query Sequence  VRKKEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVE. NKRVLNCFSYTGGFAVSAL
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Template Sequence  SRRREGLPEIERVLLGKEK. YRTIIQEGRAKFIVDXR. GQKTGFFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAA
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   159160.........170....... ..180.........190.... .....200.........210.........220.........230......
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  MGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYK
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Template Sequence  IAGADEVIGIDKSPRAIETAKENAKLNGVE. DRXKFIVGSAFEEXEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYF
Template Known Secondary structure  TT
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TT
G.GGS
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   237..240.........250.........260...... ...270.........280.........290.........300.........310.....
 
   320.........330.........340.........350.........360.........370 .........380.........390.....
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Query Sequence  DINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQF. RQAADHPVIATYPEGLYLKGFACRV
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Template Sequence  NVNFAGLNLVKDGGILVTCSCSQHVDLQXFKDXIIAAGAKAGKFLKXLEPYRTQAPDHPILXASKDTEYLKCLFLYV
Template Known Secondary structure  TT

TTS
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   316...320.........330.........340.........350.........360.........370.........380.........390..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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