Return to main results Retrieve Phyre Job Id

Job DescriptionP75876
Confidence100.00%DateThu Jan 5 12:15:21 GMT 2012
Rank4Aligned Residues376
% Identity37%Templatec1wxwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein ttha1280; PDBTitle: crystal structure of tt1595, a putative sam-dependent2 methyltransferase from thermus thermophillus hb8
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  RLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRL
Query Conservation   
 
          
 

 

  
         
  
 
    
  
  
     
   


                

Alig confidence 































....
































.









Template Conservation   
            



 


 
        ....
      
  
  
     
   


       .        

Template Sequence  RIQVNAKGAARLLSRHLWVFRRDVVSGPETPG. . . . LYPVYWGRRFLALALYNPHTDLAVRAYRFAPAE. DPVAALLENL
Template Known Secondary structure 

TT
SGGG

SS
....TT
TTSSSS

S.S
Template Predicted Secondary structure 















....











.

Template SS confidence 















































































   2.......10.........20.........30... ......40.........50.........60...... ...70......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  QQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRK
Query Conservation    
   
           


   
 
 



 

      

             
   
                   
Alig confidence 

































































..











Template Conservation    

  
            

   
 
 






      

             
   
     .. 
        
 
Template Sequence  AQALARREAVLRQDPEGGYRLVHAEGDLLPGLVVDYYAGHAVVQATAHAWEGLLPQVAEALRPHVQ. . SVLAKNDARTRE
Template Known Secondary structure  TT
TTSGGGGT
TTTT
SGGGTTTTTT
S..

GGGG
Template Predicted Secondary structure 
















..




Template SS confidence 















































































   77..80.........90.........100.........110.........120.........130.........140.. .......150....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KEGMELTQGPVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGC
Query Conservation            
 
          
 
  
 
      


   
 
  
        
  



  
 
  
   
  
 
Alig confidence 

















.













.....
















.





















.
Template Conservation    
       
 
     .    
 
  
 
  .....







  
      . 
  



  
 
      
  . 
Template Sequence  LEGLPLYVRPLLGEVPER. VQVQEGRVRYLVDL. . . . . RAAYLDQRENRLYXERF. RGERALDVFSYAGGFALHLALG. F
Template Known Secondary structure  GGT





S
.TT
T.....T


GGGGGG
.
S
TTTTTT.
Template Predicted Secondary structure 










.



.....







.









.
Template SS confidence 















































































   155....160.........170.. .......180...... ...190.........200... ......210.........220..... .
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINM
Query Conservation    
  

    

  
  
   
            
    
         








 
  
             

 
Alig confidence 
























..




















































Template Conservation    
  

        
  
   

 ..        
    
         

 

 


                  

 
Template Sequence  REVVAVDSSAEALRRAEENARLNGL. . GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNL
Template Known Secondary structure  S
TT
..
S

TT







SS
Template Predicted Secondary structure 





..


















Template SS confidence 















































































   232.......240.........250...... ...260.........270.........280.........290.........300.........
 
   324.....330.........340.........350.........360.........370.........380.........390......
Predicted Secondary structure 































Query SS confidence 








































































Query Sequence  LAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
Query Conservation   
  

 


 

  


       
   
  
          
       
 
     

  


     
 
Alig confidence 








































































Template Conservation   
   
 


 
   


           
  
          
       
 
     

  


     
 
Template Sequence  RAIKLLKEGGILATASCSHHXTEPLFYAXVAEAAQDAHRLLRVVEKRGQPFDHPVLLNHPETHYLKFAVFQVL
Template Known Secondary structure 

SSS
TT




TTS


TT
GGG



Template Predicted Secondary structure 






























Template SS confidence 








































































   310.........320.........330.........340.........350.........360.........370.........380..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions