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Job Description | P37682 | Confidence | 97.63% | Date | Thu Jan 5 11:56:58 GMT 2012 |
Rank | 75 | Aligned Residues | 79 |
% Identity | 22% | Template | d3broa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
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Resolution | 2.04 |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | T | K | L | Q | L | K | Y | R | E | L | K | I | I | S | V | I | A | A | S | E | . |
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N | I | S | H | A | A | T | V | L | G | I | A | Q | A | N | V | S | K | Y | L | A | D | F | E | S | K | V | G | L | K | V | F | D | R | T | T | R | Q | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | K | K | Y | D | L | T | G | T | Q | X | T | I | I | D | Y | L | S | R | N | K | N | K | E | V | L | Q | R | D | L | E | S | E | F | S | I | K | S | S | T | A | T | V | L | L | Q | R | X | E | I | . |
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K | K | L | L | Y | R | K | V | S | G | K | D | S | R | Q | K | C | L | K | L | T | K | K | A | N | K | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | P | Y | I | N | D | M | L | D | R | N | E | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | T | I | I | L | S | Y | X | D | S | D | Q | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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101 | . | . | . | . | . | . | . | . | 110 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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