Return to main results Retrieve Phyre Job Id

Job DescriptionP37682
Confidence97.76%DateThu Jan 5 11:56:58 GMT 2012
Rank67Aligned Residues81
% Identity20%Templated2etha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20. ........30.........40.........50......... 60.........70...
Predicted Secondary structure 







..









.....
Query SS confidence 




















. .





































. . . . .













Query Sequence  MTKLQLKYRELKIISVIAASE. . NISHAATVLGIAQANVSKYLADFESKVGLKVFDRTTRQ. . . . . LMLTPFGTALLPYI
Query Conservation 
  
 
 
  
  
  
    ..
 
 

  
 






  
  

  

  

 
    .....
 

  
  
   
Alig confidence 




















..

























.










.....













Template Conservation       

  
  

  
      
  


         

  
  
   .


 
     
 
   
 

  
       
Template Sequence  EEISDXKTTELYAFLYVALFGPKKXKEIAEFLSTTKSNVTNVVDSLEKR. GLVVREXDPVDRRTYRVVLTEKGKEIFGEI
Template Known Secondary structure  S


B
TTS
T.TS
TTTSS

Template Predicted Secondary structure 











.









Template SS confidence 















































































   25....30.........40.........50.........60.........70... ......80.........90.........100...
 
   74.....80..
Predicted Secondary structure 
Query SS confidence 








Query Sequence  NDMLDRNEQ
Query Conservation     
     
Alig confidence 








Template Conservation           
Template Sequence  LSNFESLLK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   104.....110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions