Job Description P37682 Confidence 88.13% Date Thu Jan 5 11:56:58 GMT 2012 Rank 199 Aligned Residues 219 % Identity 9% Template d1twya_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.65

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	T	I	Y	A	P	T	G	I	I	T	Y	L	S	K	H	V	I	D	K	I	K	D	I	G	D	I	T	L	S	L	K	T	C	N	L	E	R	N	A	F	Y	E	G	V	E	F	P	D	D	C	D	V	L	I	S	Y	A	P	P	K	D	E	S	L	V	A	S	F	I	T	Q	Y	A	V	T	A	Y	A
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		E	I	T	I	S	G	S	T	S	V	A	.	R	I	X	D	V	L	A	E	K	Y	N	Q	Q	H	P	E	T	Y	V	A	V	Q	G	V	G	S	T	A	G	I	S	L	L	K	K	G	V	A	D	I	A	X	T	S	R	Y	L	T	E	S	E	A	Q	N	T	L	H	T	F	T	L	A	F	D	G	L	A	I
Template Known Secondary structure													.															T	T								S											T	T	S		S					S	S				T	T	T			T	T
Template Predicted Secondary structure													.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		177	.	.	180	.														.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.										.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	R	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	H	P	I	S	R	P	D	E	L	E	H	H	S	C	I	L	I	D	S	M	M	I	D	D	A	N	I	W	R	F	N	V	A	G	S	K	E	V	R	D	Y	R	V	K	G	N	Y	V	C	.	.	.	.	.	.	.	.	.	D	N
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	N	Q	A	N	P	V	T	N	L	T	R	E	Q	L	Y	G	I	Y	K	G	Q	I	T	N	W	K	Q	V	G	G	N	D	Q	K	I	A	V	V	T	R	E	A	S	S	G	T	R	Y	S	F	E	S	L	X	G	L	T	K	T	V	K	D	R	E	V	S	D	V	A	P	T	A	L	V	V	N	S	N
Template Known Secondary structure					T	T																	T	S			B	G	G	G	G	T	S		S		B								T	T												T						T	T						S		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																											.
Query SS confidence																																											.	.	.	.	.	.																											.
Query Sequence		T	Q	S	A	L	E	L	A	R	N	H	L	G	I	V	F	A	P	D	K	S	V	Q	S	D	L	Q	D	G	T	L	V	P	C	F	Q	Q	P	Y	E	W	.	.	.	.	.	.	W	L	D	L	V	A	I	F	R	K	R	E	Y	Q	P	W	R	V	Q	Y	V	L	D	E	M	L	.	R	E	I	R	H	Q
Query Conservation																																											.	.	.	.	.	.																											.
Alig confidence																																											.	.	.	.	.	.																											.
Template Conservation
Template Sequence		S	X	X	K	T	L	V	N	H	N	T	Q	A	V	G	F	I	S	I	G	S	V	D	K	S	V	K	A	I	Q	F	E	K	A	D	P	T	S	D	N	I	A	K	H	T	Y	Q	L	S	R	P	F	L	I	L	H	Y	S	D	N	A	D	E	Q	T	K	E	F	I	A	F	L	K	S	E	S	A	K	K	L
Template Known Secondary structure												T	T							G	G	G			T	T	S						T	T	B									T	T		S												T	T	T														S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	S	Q	Q	L	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	Y	G	Y	I	X	P
Template Known Secondary structure					T	T		B
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions