 |
Job Description | P37682 | Confidence | 23.01% | Date | Thu Jan 5 11:56:58 GMT 2012 |
Rank | 399 | Aligned Residues | 84 |
% Identity | 7% | Template | d1sbpa_ |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 1.70 |
|
 |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
|
|
|
. | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | N | T | Q | S | A | L | E | L | A | R | N | H | . |
L | G | I | V | F | A | P | D | K | S | V | Q | S | D | L | Q | D | G | T | . |
. |
L | V | P | C | F | Q | Q | P | Y | E | W | W | L | D | L | V | A | I | F | R | . |
. |
. |
. |
K | R | E | Y | Q | P | W | R | V | Q | Y | V | L | D | E | M | L | R | E | I | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
| . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |
Template Sequence |   |
G | A | R | G | S | T | N | T | F | V | E | R | G | I | G | D | V | L | I | A | W | E | N | E | A | L | L | A | T | N | E | L | G | K | D | K | F | E | I | V | T | P | S | E | S | I | L | A | E | P | T | V | S | V | V | D | K | V | V | E | K | K | D | T | K | A | V | A | E | A | Y | L | K | Y | L | Y | S | P | E | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |
|
| S |  |  |  |
| B |
|
|  |  |  |  |
|  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
  |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | L | A | Q | S | Q | Q | L | R | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|   |   |
|
Template Sequence |   |
Q | E | I | A | A | K | N | F | Y | R | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|