Job Description P37682 Confidence 91.55% Date Thu Jan 5 11:56:58 GMT 2012 Rank 181 Aligned Residues 89 % Identity 16% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																	.	.	.	.
Query SS confidence																		.	.	.																																	.	.	.	.
Query Sequence		L	K	Y	R	E	L	K	I	I	S	V	I	A	A	S	E	.	.	.	N	I	S	H	A	A	T	V	L	G	I	A	Q	A	N	V	S	K	Y	L	A	D	F	E	S	K	V	G	L	K	V	F	.	.	.	.	D	R	T	T	R	Q	L	M	L	T	P	F	G	T	A	L	L	P	Y	I	N	D	M	L	D
Query Conservation																		.	.	.																																	.	.	.	.
Alig confidence																		.	.	.																																	.	.	.	.																.
Template Conservation																																																																								.
Template Sequence		L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	.	K	D	I	A	K	R	K	H	D
Template Known Secondary structure																	S	S												T																T	T	S							T	T		S	S													.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	E	Q	L	N	N	F	I	A	D	Y	K	H	E	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	A	K	T	Y	E	D	L	K	K	L	E	E	K	C	N
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions