Return to main results Retrieve Phyre Job Id

Job DescriptionP37682
Confidence99.59%DateThu Jan 5 11:56:58 GMT 2012
Rank30Aligned Residues211
% Identity12%Templated1i6aa_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  HEKRGRVTIYAPTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDESLVASFITQYA
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Template Conservation 
 
 
 



         
   
  
    
 
 
 
           
  
  
  
                     
Template Sequence  ETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEVPLFDEPML
Template Known Secondary structure 
TT

TTT
TT

TS
S

GGGTTS
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  VTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALELARNHLGIVFA
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Template Conservation       ......                                                                
    
Template Sequence  LAIYE. . . . . . DHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL
Template Known Secondary structure  T......TSGGGG
S
GGGGTTS

TTTT
SS
TTSS
SS
TTS
TTTTS
TTS
B
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   167..170. ........180.........190.........200.........210.........220.........230.........240
 
   252.......260.........270.........280.........290.........300........
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Query Sequence  PDKSVQSDLQDGTLVPCFQQPYEWWLDLVAIFRKREYQPWRVQYVLDEMLREIRHQL
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Template Conservation               
               
              
   
        
Template Sequence  PALAVPPERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHF
Template Known Secondary structure  GGGS
SSSTT
SS


TT
TTTTTT
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   241........250.........260.........270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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