Job Description P37682 Confidence 96.52% Date Thu Jan 5 11:56:58 GMT 2012 Rank 108 Aligned Residues 88 % Identity 8% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.																																			.	.	.	.	.	.	.												.
Query SS confidence																			.	.	.	.																																			.	.	.	.	.	.	.												.
Query Sequence		Q	L	K	Y	R	E	L	K	I	I	S	V	I	A	A	S	E	.	.	.	.	N	I	S	H	A	A	T	V	L	G	I	A	Q	A	N	V	S	K	Y	L	A	D	F	E	S	K	V	G	L	K	V	F	D	R	.	.	.	.	.	.	.	T	T	R	Q	L	M	L	T	P	F	G	.	T	A	L	L	P	Y
Query Conservation																			.	.	.	.																																			.	.	.	.	.	.	.												.
Alig confidence																			.	.	.	.																									.	.	.								.	.	.	.	.	.	.												.
Template Conservation																																															.	.	.
Template Sequence		N	L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	.	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I
Template Known Secondary structure		T															S	T	T			B									T	T															.	.	.		T	T	S									T	T	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		I	N	D	M	L	D	R	N	E	Q	.	L	N	N	F	I	A	D	Y	K	H	E	K	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		I	Q	K	I	V	Q	S	W	A	D	R	L	G	Q	E	L	K	E	W	E	N	G	G	E
Template Known Secondary structure																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions