Job Description P37682 Confidence 99.58% Date Thu Jan 5 11:56:58 GMT 2012 Rank 33 Aligned Residues 204 % Identity 8% Template c3n6uA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate Resolution 1.87 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	T	I	Y	A	P	T	G	I	I	T	Y	L	S	K	H	V	I	D	K	I	K	D	I	G	D	I	T	L	S	L	K	T	C	N	L	E	R	N	A	F	Y	E	G	V	E	F	P	D	D	C	D	V	L	I	S	Y	A	P	P	K	D	E	S	L	V	A	S	F	I	T	Q	Y	A	V	T	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	I	T	F	A	A	S	P	A	I	A	L	A	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A	Q	P	L	Y	V	S	D	V	V	I	V
Template Known Secondary structure															T														T	T										T	T	T	T						T	T	S		S								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	R	Y	L	E	K	H	P	I	S	R	P	D	E	L	E	H	H	S	C	I	L	I	D	S	M	M	I	D	D	A	N	I	W	R	F	N	V	A	G	S	K	E	V	R	D	Y	R	V	K	G	N	Y	V	C	D	N	T	Q	S	A	L	E	L	A	R	N	H	L	G	I	V	F	A	P	D	K	S
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	Q	R	Q	H	P	M	A	N	A	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	.	.	.	.	.	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G	V	V	A	H	S	D	L	L	T	T	M	P	R	T	L
Template Known Secondary structure				T	T		T	T	T	T			S	G	G	G	G	T	T	S								.	.	.	.	.	T	T	S	T	T										T	T													T	T	T							T	S	S		B
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	S	D	L	Q	D	G	T	L	V	P	C	F	Q	Q	P	Y	E	W	W	L	D	L	V	A	I	F	R	K	R	E	Y	Q	P	W	R	V	Q	Y	V	L	D	E	M	L	R	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	R	N	A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H	H	A
Template Known Secondary structure				S	S	T	T	G	G	G								S													T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions