Job Description P37682 Confidence 99.61% Date Thu Jan 5 11:56:58 GMT 2012 Rank 26 Aligned Residues 201 % Identity 12% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	G	R	V	T	I	Y	A	P	T	G	I	I	T	Y	L	S	K	H	V	I	D	K	I	K	D	I	G	D	I	T	L	S	L	K	T	C	N	L	E	R	N	A	F	Y	E	G	V	E	F	P	D	D	C	D	V	L	I	S	Y	A	P	P	K	D	E	S	L	V	A	S	F	I	T	Q	Y	A	V	T
Query Conservation
Alig confidence																																													.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	.	.	.	.	.	.	N	L	I	E	R	K	V	D	I	A	L	R	A	G	D	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V
Template Known Secondary structure																		T													T	T									S	T	T		.	.	.	.	.	.				T	T	S	S	S									S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	S	Q	R	Y	L	E	K	H	P	I	S	R	P	D	E	L	E	H	H	S	C	I	L	I	D	S	M	M	I	D	D	A	N	I	W	R	F	N	V	A	G	S	K	E	V	R	D	Y	R	V	K	G	N	Y	V	C	D	N	T	Q	S	A	L	E	L	A	R	N	H	L	G	I	V	F	A	P	D
Query Conservation
Alig confidence																														.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	.	.	.	.	.	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D
Template Known Secondary structure															S	S	G	G	G	G	G	G	S		B				S	.	.	.	.	.	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		K	S	V	Q	S	D	L	Q	D	G	T	L	V	P	C	F	Q	Q	P	.	Y	E	W	W	L	D	L	V	A	I	F	R	K	R	E	Y	Q	P	W	R	V	Q	Y	V	L	D	E	M	L	R	E	I	R
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L	G
Template Known Secondary structure											T	S	S					T	T	T	B													G	G	G	G	G																.
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions