Job Description P37682 Confidence 99.68% Date Thu Jan 5 11:56:58 GMT 2012 Rank 19 Aligned Residues 199 % Identity 12% Template c2hxrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism Resolution 2.05 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	T	I	Y	A	P	T	G	I	I	T	Y	L	S	K	H	V	I	D	K	I	K	D	I	G	D	I	T	L	S	L	K	T	C	N	L	E	R	N	A	F	Y	E	G	V	E	F	P	D	D	C	D	V	L	I	S	Y	A	P	P	K	D	E	S	L	V	A	S	F	I	T	Q	Y	A	V	T	A	Y	A
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		S	L	R	I	A	V	T	P	T	F	T	S	Y	F	I	G	P	L	X	A	D	F	Y	A	R	Y	P	S	I	T	L	Q	L	Q	E	X	S	Q	E	K	I	E	D	X	L	C	R	D	E	L	D	V	G	I	A	F	A	P	V	H	.	.	S	P	E	L	E	A	I	P	L	L	T	E	S	L	A	L	V	V
Template Known Secondary structure													T	T	T													T	T	S																		T	T	S		S						S	S			.	.		T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	R	Y	L	E	K	H	P	I	S	R	P	D	E	L	E	H	H	S	C	I	L	I	D	S	M	M	I	D	D	A	N	I	W	R	F	N	V	A	G	S	K	E	V	R	D	Y	R	V	K	G	N	Y	V	C	D	N	T	Q	S	A	L	E	L	A	R	N	H	L	G	I	V	F	A	P	D	K	S	V
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		A	Q	H	.	.	.	.	H	P	L	A	V	H	E	Q	V	A	L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	T	R	E	Q	I	D	H	Y	C	E	K	A	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T	S	L	S	T	L	L	P	A	A	I	A
Template Known Secondary structure			T	T	.	.	.	.	S	G	G	G	G		S				G	G	G	G	G	G								T	T	S													T	T										S												S	S		B					T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	L	Q	D	G	T	L	V	P	C	F	Q	Q	P	Y	E	W	W	L	D	L	V	A	I	F	R	K	R	E	Y	Q	P	W	R	V	Q	Y	V	L	D	E	M	L	R	E	I
Query Conservation
Alig confidence					.	.	.
Template Conservation					.	.	.
Template Sequence		T	Q	H	.	.	.	D	G	L	K	A	I	S	L	A	P	P	L	L	E	R	T	A	V	L	L	R	R	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	X	A	L	D	K	C
Template Known Secondary structure					.	.	.	T	T							S	S		S											T	T	S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		246	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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