Job Description P64610 Confidence 99.69% Date Thu Jan 5 12:09:54 GMT 2012 Rank 146 Aligned Residues 148 % Identity 16% Template c3rgfA_ PDB info PDB header:transferase,transcription Chain: A: PDB Molecule:cyclin-dependent kinase 8; PDBTitle: crystal structure of human cdk8/cycc Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																																																	.	.
Query SS confidence																					.	.	.	.	.																																																	.	.
Query Sequence		R	L	S	E	Q	S	P	L	G	T	G	R	H	R	K	C	Y	A	H	.	.	.	.	.	P	E	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	D	K	E	I	R	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H	G	T	.	.	V	E	T	D	C	G
Query Conservation																					.	.	.	.	.																																																	.	.
Alig confidence																					.	.	.	.	.															.	.																	.	.	.	.	.												.	.
Template Conservation																																								.	.																	.	.	.	.	.
Template Sequence		R	V	E	D	L	F	E	Y	E	G	C	K	V	G	H	V	Y	K	A	K	R	K	D	G	K	D	D	K	D	Y	A	L	K	Q	I	E	G	T	.	.	G	I	S	M	S	A	C	R	E	I	A	L	L	R	E	L	.	.	.	.	.	K	H	P	N	V	I	S	L	Q	K	V	F	L	S	H	A	D	R	K
Template Known Secondary structure										S	S												S	S	S	S											S	S	S	.	.	S																.	.	.	.	.			T	T	B										T	T	T	T
Template Predicted Secondary structure																																								.	.																	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Y	V	Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H	R	I	S	E	S	E	V	I	P	V	V	C	D	N	I	G
Query Conservation
Alig confidence																						.	.	.																																																							.
Template Conservation																						.	.	.																																																							.
Template Sequence		V	W	L	L	F	D	Y	A	E	H	D	L	W	H	I	I	K	F	H	R	.	.	.	A	S	K	L	P	R	G	M	V	K	S	L	L	Y	Q	I	L	D	G	I	H	Y	L	H	A	N	W	V	L	H	R	D	L	K	P	A	N	I	L	V	M	G	E	G	P	E	R	G	R	V	K	I	A	D	.	M	G
Template Known Secondary structure										S												.	.	.																										T	T								G	G	G						S	S	T	T	T	T							.	T	T
Template Predicted Secondary structure																						.	.	.																																																							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.
		156	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	T	L	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	R	V	T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions