Job Description P64610 Confidence 99.90% Date Thu Jan 5 12:09:54 GMT 2012 Rank 23 Aligned Residues 187 % Identity 15% Template c3op5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1 Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure											.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence											.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		L	S	E	Q	S	P	L	G	T	.	.	G	R	H	R	K	C	Y	A	H	.	.	.	.	.	.	.	.	P	E	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	D	K	E	I	R	.	.	.	.	.	.	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H
Query Conservation											.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence											.	.										.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	W	K	V	G	L	P	I	G	Q	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L	G	V	P	K	Y	W
Template Known Secondary structure		T											.													S	S				T	T		S								T	T																											T	T		S				S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		68	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		G	T	V	E	.	.	.	.	T	D	C	G	T	G	Y	V	Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H	R	I	S	E
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.														.	.	.	.																																																				.	.
Template Conservation																							.	.	.	.																																																				.	.
Template Sequence		G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M	D	R	F	G	.	.	.	.	S	D	L	Q	K	I	Y	E	A	N	A	K	R	F	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I	K	A	S	N	L	L	L	N	.	.	Y	K
Template Known Secondary structure									T	T													.	.	.	.										T	T	S																								T	T								G	G	G					.	.	S	S
Template Predicted Secondary structure																							.	.	.	.																																																				.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	I	P	V	V	C	D	N	I	G	E	S	T	L	I	P	L	A	T	W	S	K	W	C	C	L	R	K	Q	E	R	L	W	K	R	F	I	A	Q	P	A	L	A	I	A	L	Q	K	D	L	Q	P	R	E	S	K	T	L	A	L	T	S	R
Query Conservation
Alig confidence											.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	D	Q	V	Y	L	V	D	.	Y	G	L	A	Y	R	Y	C	P	E	G	V	H	K	A	Y	A	.	.	.	.	.	.	.	.	.	.	.	A	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R
Template Known Secondary structure			T	T							.		T	T				S	S	G	G	G					S	S	.	.	.	.	.	.	.	.	.	.	.			S	S							T	T	T							T	T
Template Predicted Secondary structure											.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions