Job Description P64610 Confidence 99.87% Date Thu Jan 5 12:09:54 GMT 2012 Rank 42 Aligned Residues 155 % Identity 21% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																		.
Query SS confidence																						.	.	.	.	.	.	.	.																		.
Query Sequence		R	L	S	E	Q	S	P	L	G	T	G	R	H	R	K	C	Y	A	H	P	.	.	.	.	.	.	.	.	E	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	.	D	K	E	I	R	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H	G	T	V	E	T	D
Query Conservation																						.	.	.	.	.	.	.	.																		.
Alig confidence																						.	.	.	.	.	.	.	.																		.															.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H	L	T	E	R	E	A	L	M	S	E	L	K	V	L	S	Y	L	.	.	.	.	G	N	H	M	N	I	V	N	L	L	G	A	C	T	I	G
Template Known Secondary structure		G											S	S										S	S	S	S	T	T												T	T																				.	.	.	.				T	T	B									S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.					.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	T	G	Y	V	Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T
Template Known Secondary structure		S	S									T	T		B									G	G	G	G	S		S	S	S					B	T	T	B																										T	T				S			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	S	E	S	E	V	I	P	V	V	C	D	N	I	G	E	S	T	L	I	P	L	A	T	W	S
Query Conservation
Alig confidence					.	.	.	.							.
Template Conservation					.	.	.	.							.
Template Sequence		H	G	R	.	.	.	.	I	T	K	I	C	D	.	F	G	L	A	R	D	I	K	N	D	S	N	Y
Template Known Secondary structure		T	T	T	.	.	.	.							.		G	G	G			G	G	G		T	T	S
Template Predicted Secondary structure					.	.	.	.							.
Template SS confidence
		802	.	.					.	.	.	.	.	810		.	.	.	.	.	.	.	.	.	820	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions