Job Description P64610 Confidence 99.78% Date Thu Jan 5 12:09:54 GMT 2012 Rank 102 Aligned Residues 153 % Identity 17% Template c2y94A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit alpha-1; PDBTitle: structure of an active form of mammalian ampk Resolution 3.24 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		R	L	S	E	Q	S	P	L	G	T	G	R	H	R	K	C	Y	A	H	P	E	.	.	.	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	D	K	E	I	R	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H	G	T	V	E	T	D	C	G	T	G	Y	V
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																	.	.
Template Conservation																																																										.	.
Template Sequence		H	Y	I	L	G	D	T	L	G	V	G	T	F	G	K	V	K	V	G	K	H	E	L	T	G	H	K	V	A	V	K	I	L	N	R	Q	K	I	R	S	L	D	V	V	G	K	I	R	R	E	I	Q	N	L	K	L	.	.	F	R	H	P	H	I	I	K	L	Y	Q	V	I	S	T	P	S	D	I	F	M	V
Template Known Secondary structure		T											S	S	S								T	T	T																	T	T	T												T	T	.	.				T	T	B										S	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H	R	I	S	E	S	E	V	I	P	V	V	C	D	N	I	G	E	S	T	L
Query Conservation
Alig confidence																	.	.	.	.																																													.	.	.	.							.
Template Conservation																	.	.	.	.																																													.	.	.	.							.
Template Sequence		M	E	Y	V	S	G	G	E	L	F	D	Y	I	C	K	.	.	.	.	N	G	R	L	D	E	K	E	S	R	R	L	F	Q	Q	I	L	S	G	V	D	Y	C	H	R	H	M	V	V	H	R	D	L	K	P	E	N	V	L	L	D	A	H	M	.	.	.	.	N	A	K	I	A	D	.	F	G	L	S	N	M
Template Known Secondary structure						S	S							T	T	S	.	.	.	.	S	S	S																						T	T	T				S			S	G	G	G					T	T		.	.	.	.							.		S	S
Template Predicted Secondary structure																	.	.	.	.																																													.	.	.	.							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.		.	.	160	.	.	.
		160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	A	T	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	S	D	G	E	F	L
Template Known Secondary structure				T	T			B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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