Job Description P64610 Confidence 99.77% Date Thu Jan 5 12:09:54 GMT 2012 Rank 109 Aligned Residues 168 % Identity 17% Template c2r7bA_ PDB info PDB header:signaling protein, transferase Chain: A: PDB Molecule:phosphoinositide-dependent protein kinase 1; PDBTitle: crystal structure of the phosphoinositide-dependent kinase-2 1 (pdk-1)catalytic domain bound to a dibenzonaphthyridine3 inhibitor Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		R	L	S	E	Q	S	P	L	G	T	G	R	H	R	K	C	Y	A	H	P	E	.	.	.	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	D	K	E	I	R	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H	G	T	V	E	T	D	C	G	T	G	Y	V
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																	.	.
Template Conservation																																																										.	.
Template Sequence		D	F	K	F	G	K	I	L	G	E	G	S	F	S	T	V	V	L	A	R	E	L	A	T	S	R	E	Y	A	I	K	I	L	E	K	R	H	I	I	K	E	N	K	V	P	Y	V	T	R	E	R	D	V	M	S	R	.	.	L	D	H	P	F	F	V	K	L	Y	F	T	F	Q	D	D	E	K	L	Y	F	G
Template Known Secondary structure		G											S	S									T	T	T																	T	T														T	.	.				T	T	B										S	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H	R	I	S	E	S	E	V	I	P	V	V	C	D	N	I	G	E	S	T	L
Query Conservation
Alig confidence																	.	.	.	.																																													.	.	.	.							.
Template Conservation																	.	.	.	.																																													.	.	.	.							.
Template Sequence		L	S	Y	A	K	N	G	E	L	L	K	Y	I	R	K	.	.	.	.	I	G	S	F	D	E	T	C	T	R	F	Y	T	A	E	I	V	S	A	L	E	Y	L	H	G	K	G	I	I	H	R	D	L	K	P	E	N	I	L	L	N	E	D	M	.	.	.	.	H	I	Q	I	T	D	.	F	G	T	A	K	V
Template Known Secondary structure						T	T		B								.	.	.	.	S	S	S																							T	T								T	T	T					T	T	S	.	.	.	.							.		T	T
Template Predicted Secondary structure																	.	.	.	.																																													.	.	.	.							.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.		.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	A	T	W	S	K	W	C	C	L	R	K	Q	E	R	L	W	K	R	F	I	A	Q	P	A	L	A	I	A	L	Q	K	D	L	Q	P	R	E	S	K	T	L	A	L	T	S	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	T	A	Q	Y	V	S	P	E	L	L	T	E	K	S	A	C	K	S
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G								S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.																												.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions