Return to main results Retrieve Phyre Job Id

Job DescriptionP64610
Confidence99.49%DateThu Jan 5 12:09:54 GMT 2012
Rank210Aligned Residues159
% Identity14%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20. ........30.........40.........50.........60.........70.........80
Predicted Secondary structure 











..




















Query SS confidence 


















. .


























































Query Sequence  RLSEQSPLGTGRHRKCYAH. . PEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVY
Query Conservation   
     

 
    

  ..      



                               
                 
Alig confidence 


















..































.....





















Template Conservation   
     

 
 

 


     
  



 
             
      
..... 
 

                 
Template Sequence  NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC. . . . . RHPHLVSLIGFCDERNEMILIY
Template Known Secondary structure 

S



S
B
SSS
TT



S

SSGGGS
.....

TTB




TT

Template Predicted Secondary structure 















.....













Template SS confidence 















































































   40.........50.........60.........70.........80.........90.. .......100.........110....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  DVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLI
Query Conservation                                  

   
  

   







 



           



 
    
Alig confidence 

























































....

















Template Conservation                                                            ....                  
Template Sequence  KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL. . . . DENFVPKITDFGISKKGT
Template Known Secondary structure 

TT
BTGGGSSSS


S



TT
S


STT....
TT




TT

S
Template Predicted Secondary structure 





























....











Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.. .......180.........190
 
   161........170
Predicted Secondary structure 





Query SS confidence 









Query Sequence  PLATWSKWCC
Query Conservation 
         
Alig confidence 









Template Conservation            
Template Sequence  ELDQTHLVVK
Template Known Secondary structure  SSS






Template Predicted Secondary structure 









Template SS confidence 









   191........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions