Job Description P64610 Confidence 99.88% Date Thu Jan 5 12:09:54 GMT 2012 Rank 35 Aligned Residues 170 % Identity 19% Template c2a1aB_ PDB info PDB header:protein synthesis/transferase Chain: B: PDB Molecule:interferon-induced, double-stranded rna-activated protein PDBTitle: pkr kinase domain-eif2alpha complex Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																							.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence																							.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		R	L	S	E	Q	S	P	L	G	T	G	R	H	R	K	C	Y	A	H	P	E	.	.	.	D	A	Q	R	C	I	K	I	V	Y	H	R	G	D	G	G	D	K	E	I	R	R	E	L	K	Y	Y	A	H	L	G	R	R	L	K	D	W	S	G	I	P	R	Y	H	G	T	V	E	T	.	.	.	.	.	.	.
Query Conservation																							.	.	.																																																		.	.	.	.	.	.	.
Alig confidence																							.	.	.														.	.	.	.														.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.														.	.	.	.	.
Template Sequence		D	F	K	E	I	E	L	I	G	S	G	G	F	G	Q	V	F	K	A	K	H	R	I	D	G	K	T	Y	V	I	K	R	V	K	Y	N	N	.	.	.	.	E	K	A	E	R	E	V	K	A	L	A	K	L	.	.	.	.	.	D	H	V	N	I	V	H	Y	N	G	C	W	D	G	F	D	Y	D	P	E	T
Template Known Secondary structure													S	S									S	S	S													S	.	.	.	.	G	G	G	G							T	T		.	.	.	.	.			T	T	B														T	T
Template Predicted Secondary structure																																							.	.	.	.														.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
							73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	C	G	T	G	Y	V	Y	D	V	I	A	D	F	D	G	K	P	S	I	T	L	T	E	F	A	E	Q	C	R	Y	E	E	D	I	A	Q	L	R	Q	L	L	K	Q	L	K	R	Y	L	Q	D	N	R	I	V	T	M	S	L	K	P	Q	N	I	L	C	H	R	I	S	E	S	E	V	I
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																									.	.																																													.	.	.	.
Template Conservation																															.	.																																													.	.	.	.
Template Sequence		S	S	R	S	K	T	K	C	L	F	I	Q	M	E	F	C	D	K	G	T	L	E	Q	W	I	E	K	R	R	.	.	G	E	K	L	D	K	V	L	A	L	E	L	F	E	Q	I	T	K	G	V	D	Y	I	H	S	K	K	L	I	N	R	D	L	K	P	S	N	I	F	L	V	D	T	K	.	.	.	.	Q
Template Known Secondary structure																		T	T		B									T	.	.	T	S																								T	T				T	T		S	G	G	G						T	T	.	.	.	.
Template Predicted Secondary structure																															.	.																																													.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.					410
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	C	D	N	I	G	E	S	T	L	I	P	L	A	T	W	S	K	W	C	C	L	R	K	Q	E	R	L	W	K	R	F	I	A	Q	P	A	L	A	I	A	L	Q	K	D	L	Q	P	R	E	S	K	T	L	A	L	T	S	R
Query Conservation
Alig confidence							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	I	G	D	.	F	G	L	V	T	S	L	K	N	D	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	K	G	T	L	R	Y	M	S	P	E	Q	I	S	S	Q	D	Y	G	K	E
Template Known Secondary structure							.		T	T				S	S			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			T	T	S						S		S				T
Template Predicted Secondary structure							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		428	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.																					.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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