Return to main results Retrieve Phyre Job Id

Job DescriptionP64610
Confidence99.17%DateThu Jan 5 12:09:54 GMT 2012
Rank261Aligned Residues147
% Identity17%Templatec1y6aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: crystal structure of vegfr2 in complex with a 2-anilino-5-aryl-oxazole2 inhibitor
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20. ........30.........40.........50.........60.........70........
Predicted Secondary structure 











....




















Query SS confidence 


















. . . .
























































Query Sequence  RLSEQSPLGTGRHRKCYAH. . . . PEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGY
Query Conservation   
     

 
    

  ....      



                               
               
Alig confidence 


















....













...














....




















Template Conservation   
     

 
 

 

           



 
   ...       

  
  
....     
               
Template Sequence  RLKLGKPLGRQVIEADAFGIDKTATCRTVAVKMLTHS. . . EHRALMSELKILIHI. . . . GHHLNVVNLLGACTKPGGPLM
Template Known Secondary structure  G

STTSSS


.......


TTB


SSSS

Template Predicted Secondary structure 









.......















Template SS confidence 















































































   831........840.........850.........860....... ..870.........880.. .......890.........900...
 
   7980.........90.........100. ........110.........120.........130.........140.........150....
Predicted Secondary structure 






....



















Query SS confidence 






















. . . .




















































Query Sequence  VYDVIADFDGKPSITLTEFAEQC. . . . RYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNI
Query Conservation                         ....           

   
  

   







 



           



 
Alig confidence 






















....








































....





.
Template Conservation                                                                      ....      . 
Template Sequence  VIVEFCKFGNLSTYLRSKRNEFVPYDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN. . . . VVKICD. F
Template Known Secondary structure 

TT
BTTTSB




B
TT


S


GGG
GGG....


.
Template Predicted Secondary structure 






































....

.
Template SS confidence 















































































   912.......920.........930.........940.........950.........960.........970......... 980..... .
 
   155....160.
Predicted Secondary structure 






Query SS confidence 






Query Sequence  GESTLIP
Query Conservation 
    

Alig confidence 






Template Conservation         
Template Sequence  PLKWMAP
Template Known Secondary structure 
GGG

Template Predicted Secondary structure 






Template SS confidence 






   1066...1070..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions