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Job DescriptionP37344
Confidence99.45%DateThu Jan 5 11:55:23 GMT 2012
Rank50Aligned Residues211
% Identity21%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KDNLLGEANSFLEVLEQVSHL. . . . . . . . . . APLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLD
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Template Sequence  FKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEA. . . NVPFFHISGSDF. . . . . .
Template Known Secondary structure  GGG

S

TTTT



S

TTSS...T

GGGT......
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   160.........170.........180.........190.........200.........210........ .220.........230
 
   75....80.........90.........100.........110.... .....120.........130.........140.........
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Query Sequence  SELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPM. . . . . MVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATN
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Template Sequence  . . . VELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDG. . . . . . . . . FDSKEGIIVMAATN
Template Known Secondary structure  ...TT

TTT
STGGGT



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GGGTS
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Query Sequence  AD. . . LPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNI
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Template Sequence  RPDILDPALLRPGRFDK. . . . . . . KIVVDPPDMLGRKKILEIHT. . . . . . . . . . . . . RNKPLAEDVNLEIIAKRTPGFVG
Template Known Secondary structure 
GGGS
GGGGSTTSS
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B
TT

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   308.310.........320.... .....330.........340.... .....350.........360.......
 
   227..230.........240 .........250......
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Query Sequence  RELKNVVERSVYRH. . . GTSDYPLDDIIIDPFK
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Template Sequence  ADLENLVNEAALLAAREGRDKITMKDFEEAIDR
Template Known Secondary structure  TT
SSB
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   368.370.........380.........390.........400
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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